Boosting heritability

"Boosting heritability" is a software tool to enhance the precision and reliability of heritability estimates in genetic studies. Heritability, a cornerstone concept in genetics, measures the proportion of observed variability in a trait attributed to genetic differences among individuals. Traditional approaches to estimating heritability often rely on random-effect models, primarily for computational convenience. However, these methods can sometimes lack the precision and adaptability required for complex genetic data, mainly when dealing with high-dimensional datasets.

In contrast, "boosting heritability" employs a fixed-effect model approach, which has historically been less explored due to its computational complexity. This strategy integrates the strengths of various recent methodologies, employing a high-dimensional linear model to estimate heritability. One of the critical innovations of "boosting heritability" is its use of a multiple-sample splitting strategy. This approach divides the dataset into several subsamples, performs estimation on each, and then combines these estimates to achieve a final heritability estimate. This technique enhances the stability and accuracy of the heritability estimate, making it particularly effective for analyzing complex and high-dimensional genetic data.

Topic

Genotype and phenotype;Epigenomics;Genetic variation;Mapping

Detail

  • Operation: Splitting;Regression analysis;Antimicrobial resistance prediction

  • Software interface: Command-line interface

  • Language: R

  • License: Not stated

  • Cost: Free of charge

  • Version name: -

  • Credit: European Research Council.

  • Input: -

  • Output: -

  • Contact: The Tien Mai t.t.mai@medisin.uio.no

  • Collection: -

  • Maturity: -

Publications

  • Boosting heritability: estimating the genetic component of phenotypic variation with multiple sample splitting.
  • Mai TT, et al. Boosting heritability: estimating the genetic component of phenotypic variation with multiple sample splitting. Boosting heritability: estimating the genetic component of phenotypic variation with multiple sample splitting. 2021; 22:164. doi: 10.1186/s12859-021-04079-7
  • https://doi.org/10.1186/S12859-021-04079-7
  • PMID: 33773584
  • PMC: PMC8004405

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